研究动态
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通过生物信息学方法定向靶向B细胞成熟抗原特异性CAR T细胞:从体外模拟到体内实验。

Directed targeting of B-cell maturation antigen-specific CAR T cells by bioinformatic approaches: From in-silico to in-vitro.

发表日期:2023 Mar 08
作者: Ali Moazzeni, Maryam Kheirandish, Gholamreza Khamisipour, Fatemeh Rahbarizadeh
来源: Experimental Hematology & Oncology

摘要:

嵌合抗原受体(CAR)T细胞是癌症免疫治疗中的突破。成功的CAR T细胞疗法的主要步骤是设计特定的单链抗体变量(scFv)。本研究旨在利用生物信息学技术验证设计的抗BCMA(B细胞成熟抗原)CAR,并进行以下实验评估。在设计了第二代抗BCMA CAR之后,使用不同的建模和对接服务器(包括Expasy、I-TASSER、HDock和PyMOL软件)确认了抗BCMA CAR构建物的蛋白质结构、功能预测、配体-受体界面的物理化学互补性以及结合位点分析。为生成CAR T细胞,分离的T细胞进行了转导。然后,采用实时-PCR和流式细胞术方法分别确认了抗BCMA CAR mRNA及其表面表达。使用抗(Fab’)2和抗CD8抗体评估抗BCMA CAR的表面表达。最后,将抗BCMA CAR T细胞与BCMA +/-细胞系共培养,以评估CD69和CD107a作为激活和细胞毒性标志物的表达。体外结果证实了scFv(89 ± 1.15%)和CD8α(54 ± 2.88%)的高表达。 CD69(91.97 ±1.7%)和CD107a(92.05 ± 1.29%)的表达显著增加,表明适当的激活和细胞毒性。体内研究结果证实了受体-配体结合位点上的功能区域的正确定位和完美取向。高激活和细胞毒性的抗BCMA CAR T细胞表明,我们的CAR构建方法将适用于定义CAR T细胞疗法的路线图。 ©2023 Elsevier GmbH出版。
Chimeric Antigen Receptor (CAR) T-cell is a breakthrough in cancer immunotherapy. The primary step of successful CAR T cell therapy is designing a specific single-chain fragment variable (scFv). This study aims to verify the designed anti-BCMA (B cell maturation antigen) CAR using bioinformatic techniques with the following experimental evaluations.Following the second generation of anti-BCMA CAR designing, the protein structure, function prediction, physicochemical complementarity at the ligand-receptor interface, and biding sites analysis of anti-BCMA CAR construct were confirmed using different modeling and docking server, including Expasy, I-TASSER, HDock, and PyMOL software. To generate CAR T-cells, isolated T cells were transduced. Then, anti-BCMA CAR mRNA and its surface expression were confirmed by real-time -PCR and flow cytometry methods, respectively. To evaluate the surface expression of anti-BCMA CAR, anti-(Fab')2 and anti-CD8 antibodies were employed. Finally, anti-BCMA CAR T cells were co-cultured with BCMA+/- cell lines to assess the expression of CD69 and CD107a as activation and cytotoxicity markers.In-silico results approved the suitable protein folding, perfect orientation, and correct locating of functional domains at the receptor-ligand binding site. The in-vitro results confirmed high expression of scFv (89 ± 1.15% (and CD8α (54 ± 2.88%). The expression of CD69 (91.97 ± 1.7%) and CD107a (92.05 ± 1.29%) were significantly increased, indicating appropriate activation and cytotoxicity.In-silico studies before experimental assessments are crucial for state-of-art CAR designing. Highly activation and cytotoxicity of anti-BCMA CAR T-cell revealed that our CAR construct methodology would be applicable to define the road map of CAR T cell therapy.Copyright © 2023. Published by Elsevier GmbH.