PBRM1缺失的PBAF复合物将异常基因组位点作为靶点,以激活NF-κB通路,从而导致清晰细胞肾癌。
PBRM1-deficient PBAF complexes target aberrant genomic loci to activate the NF-κB pathway in clear cell renal cell carcinoma.
发表日期:2023 Apr 24
作者:
Xiaosai Yao, Jing Han Hong, Amrita M Nargund, Michelle Shu Wen Ng, Hong Lee Heng, Zhimei Li, Peiyong Guan, Masahiro Sugiura, Pek Lim Chu, Loo Chien Wang, Xiaofen Ye, James Qu, Xiu Yi Kwek, Jeffrey Chun Tatt Lim, Wen Fong Ooi, Joanna Koh, Zhenxun Wang, You-Fu Pan, Yan Shan Ong, Kiat-Yi Tan, Jian Yuan Goh, Sheng Rong Ng, Luca Pignata, Dachuan Huang, Alexander Lezhava, Su Ting Tay, Minghui Lee, Xun Hui Yeo, Wai Leong Tam, Sun Young Rha, Shang Li, Ernesto Guccione, Andrew Futreal, Jing Tan, Joe Poh Sheng Yeong, Wanjin Hong, Robert Yauch, Kenneth Tou-En Chang, Radoslaw M Sobota, Patrick Tan, Bin Tean Teh
来源:
NATURE CELL BIOLOGY
摘要:
PBRM1编码PBAF SWI/SNF染色质重塑酶的附属副基因,PBRM1失活是肾癌中频繁发生的事件。然而,PBRM1损失对染色质重塑的影响尚未得到充分的研究。在这里,我们表明,在VHL缺陷性肾肿瘤中,PBRM1缺陷导致外显子PBAF复合物出现在新生基因组位点,激活增癌NF-κB通路。PBRM1缺陷PBAF复合物保持SMARCA4和ARID2之间的关联,但BRD7连接松散。PBAF复合物从启动子附近区域重新分布到包含NF-κB基序的远端增强子,提高PBRM1缺陷模型和临床样本中的NF-κB活性。SMARCA4的ATP酶功能维持与PBRM1损失相关的预先存在和新获得的RELA的染色质占用,激活下游靶基因的表达。蛋白酶体抑制剂博来佐米抑制了RELA的占用,抑制了NF-κB的激活,并延缓了PBRM1缺陷肿瘤的生长。最后,PBRM1通过抑制残留的PBRM1缺陷PBAF复合物对促进肿瘤的NF-κB靶基因进行异常解离来保护染色质。©2023年。作者,独家许可Springer Nature Limited使用。
PBRM1 encodes an accessory subunit of the PBAF SWI/SNF chromatin remodeller, and the inactivation of PBRM1 is a frequent event in kidney cancer. However, the impact of PBRM1 loss on chromatin remodelling is not well examined. Here we show that, in VHL-deficient renal tumours, PBRM1 deficiency results in ectopic PBAF complexes that localize to de novo genomic loci, activating the pro-tumourigenic NF-κB pathway. PBRM1-deficient PBAF complexes retain the association between SMARCA4 and ARID2, but have loosely tethered BRD7. The PBAF complexes redistribute from promoter proximal regions to distal enhancers containing NF-κB motifs, heightening NF-κB activity in PBRM1-deficient models and clinical samples. The ATPase function of SMARCA4 maintains chromatin occupancy of pre-existing and newly acquired RELA specific to PBRM1 loss, activating downstream target gene expression. Proteasome inhibitor bortezomib abrogates RELA occupancy, suppresses NF-κB activation and delays growth of PBRM1-deficient tumours. In conclusion, PBRM1 safeguards the chromatin by repressing aberrant liberation of pro-tumourigenic NF-κB target genes by residual PBRM1-deficient PBAF complexes.© 2023. The Author(s), under exclusive licence to Springer Nature Limited.