研究动态
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星形细胞脑肿瘤中昼夜节律钟相关基因表达谱的差异。

Variances in the Expression Profile of Circadian Clock-Related Genes in Astrocytic Brain Tumors.

发表日期:2024 Jun 26
作者: Rafał Staszkiewicz, Dawid Sobański, Wojciech Pulka, Dorian Gładysz, Marcin Gadzieliński, Damian Strojny, Beniamin Oskar Grabarek
来源: Brain Structure & Function

摘要:

这项研究探讨了生物钟基因在星形细胞肿瘤(一种常见的脑肿瘤类型)进展中的作用。目的是评估这些基因与肿瘤分级相关的表达模式。使用微阵列分析、qRT-PCR 和甲基化特异性 PCR,我们检查了 60 名患者肿瘤样本中的基因表达、DNA 甲基化模式和 microRNA 相互作用。我们的结果表明关键生物钟基因的表达,例如生物钟调节剂(CLOCK)、蛋白激酶AMP激活的催化亚基α1(PRKAA1)、蛋白激酶AMP激活的催化亚基α2(PRKAA2)、蛋白激酶AMP -激活的非催化亚基β 1 (PRKAB1)、蛋白激酶AMP激活的非催化亚基β 2 (PRKAB2)、周期昼夜节律调节器1 (PER1)、周期昼夜节律调节器2 (PER2)和周期昼夜节律调节器3 (PER3) ,随肿瘤分级显着变化。值得注意的是,在较高级别的肿瘤中观察到 CLOCK 基因表达和蛋白质水平增加。 DNA 甲基化分析表明,PER1-3 基因的启动子区域始终被甲基化,这表明其表达减少的机制。我们的研究结果还强调了涉​​及 miRNA 的复杂调控机制,例如 hsa-miR-106-5p、hsa-miR-20b-5p 和 hsa-miR-30d-3p,这些机制影响生物钟相关基因的表达。这强调了生物钟基因在星形细胞肿瘤进展中的重要性,并强调了它们作为生物标志物和治疗靶点的潜力。需要进一步的研究来验证这些结果并探索其临床意义。
This study explores the role of circadian clock genes in the progression of astrocytic tumors, a prevalent type of brain tumor. The aim was to assess the expression patterns of these genes in relation to the tumor grade. Using microarray analysis, qRT-PCR, and methylation-specific PCR, we examined gene expression, DNA methylation patterns, and microRNA interactions in tumor samples from 60 patients. Our results indicate that the expression of key circadian clock genes, such as clock circadian regulator (CLOCK), protein kinase AMP-activated catalytic subunit alpha 1 (PRKAA1), protein kinase AMP-activated catalytic subunit alpha 2 (PRKAA2), protein kinase AMP-activated non-catalytic subunit beta 1 (PRKAB1), protein kinase AMP-activated non-catalytic subunit beta 2 (PRKAB2), period circadian regulator 1 (PER1), period circadian regulator 2 (PER2) and period circadian regulator 3 (PER3), varies significantly with the tumor grade. Notably, increased CLOCK gene expression and protein levels were observed in higher-grade tumors. DNA methylation analysis revealed that the promoter regions of PER1-3 genes were consistently methylated, suggesting a mechanism for their reduced expression. Our findings also underscore the complex regulatory mechanisms involving miRNAs, such as hsa-miR-106-5p, hsa-miR-20b-5p, and hsa-miR-30d-3p, which impact the expression of circadian clock-related genes. This underscores the importance of circadian clock genes in astrocytic tumor progression and highlights their potential as biomarkers and therapeutic targets. Further research is needed to validate these results and explore their clinical implications.